What's New on the AnimalGenome.org Web Site


 

Newly updated pages in the last 30 days

  1. 2024-02-22 04:02am: https://www.animalgenome.org/community/angenmap
  2. 2024-02-22 02:02am: https://www.animalgenome.org/QTLdb/cattle/
  3. 2024-02-22 02:02am: https://www.animalgenome.org/QTLdb/horse/
  4. 2024-02-22 02:02am: https://www.animalgenome.org/QTLdb/goat/
  5. 2024-02-22 02:02am: https://www.animalgenome.org/QTLdb/sheep/
  6. 2024-02-22 02:02am: https://www.animalgenome.org/QTLdb/pig/
  7. 2024-02-21 04:17pm: https://www.animalgenome.org/../isubeefdb/phenotypes
  8. 2024-02-21 09:45am: https://www.animalgenome.org/../misc/roomshare
  9. 2024-02-21 09:05am: https://www.animalgenome.org/../misc/a/roomshare
  10. 2024-02-21 09:01am: https://www.animalgenome.org/community/meetings
  11. 2024-02-20 10:28pm: https://www.animalgenome.org/../isubeefdb/docs/pediIDguides
  12. 2024-02-20 03:04am: https://www.animalgenome.org/community/FAANG
  13. 2024-02-19 06:02pm: https://www.animalgenome.org/community/FAANG (3)
  14. 2024-02-19 09:53am: https://www.animalgenome.org/
  15. 2024-02-19 08:54am: https://www.animalgenome.org/community/angenmap (3)
  16. 2024-02-19 02:02am: https://www.animalgenome.org/QTLdb/chicken/
  17. 2024-02-18 09:11pm: https://www.animalgenome.org/../isubeefdb/genotypes
  18. 2024-02-18 09:10pm: https://www.animalgenome.org/../isubeefdb/projects
  19. 2024-02-16 08:45am: https://www.animalgenome.org/community/NRSP8/
  20. 2024-02-15 04:27pm: https://www.animalgenome.org/../isubeefdb/docs/pediEntrySOP
  21. 2024-02-14 09:09am: https://www.animalgenome.org/../isubeefdb/pedigree
  22. 2024-02-14 08:42am: https://www.animalgenome.org/QTLdb/
  23. 2024-02-13 03:11pm: https://www.animalgenome.org/../projects/lbo/
  24. 2024-02-13 03:10pm: https://www.animalgenome.org/../projects/lbo/
  25. 2024-02-13 02:56pm: https://www.animalgenome.org/QTLdb/
  26. 2024-02-13 02:55pm: https://www.animalgenome.org/QTLdb/
  27. 2024-02-13 11:34am: https://www.animalgenome.org/../coordinators/
  28. 2024-02-10 11:27am: https://www.animalgenome.org/QTLdb/
  29. 2024-02-10 10:51am: https://www.animalgenome.org/community/NRSP8/
  30. 2024-02-09 09:53am: https://www.animalgenome.org/../NRSP8/2024/newNRSP8
  31. 2024-02-08 04:15pm: https://www.animalgenome.org/../angenmap/
  32. 2024-02-08 04:12pm: https://www.animalgenome.org/../FAANG/bbs
  33. 2024-02-08 10:29am: https://www.animalgenome.org/../FAANG/bbs
  34. 2024-02-08 09:31am: https://www.animalgenome.org/../FAANG/bbs
  35. 2024-02-08 09:17am: https://www.animalgenome.org/../FAANG/bbs
  36. 2024-02-07 09:40pm: https://www.animalgenome.org/../projects/vt/
  37. 2024-02-07 09:02pm: https://www.animalgenome.org/../projects/vt/
  38. 2024-02-07 05:02pm: https://www.animalgenome.org/../FAANG/bbs
  39. 2024-02-07 04:54pm: https://www.animalgenome.org/../FAANG/bbs
  40. 2024-02-07 04:06pm: https://www.animalgenome.org/../projects/vt/
  41. 2024-02-07 03:18pm: https://www.animalgenome.org/../projects/vt/ (2)
  42. 2024-02-07 03:18pm: https://www.animalgenome.org/../projects/vt/
  43. 2024-02-06 02:16pm: https://www.animalgenome.org/../isudairydb/projects
  44. 2024-02-06 02:16pm: https://www.animalgenome.org/../isudairydb/genotypes
  45. 2024-02-05 12:35pm: https://www.animalgenome.org/../FAANG/bbs
  46. 2024-02-05 09:12am: https://www.animalgenome.org/../projects/vt/
  47. 2024-02-05 09:11am: https://www.animalgenome.org/../projects/vt/
  48. 2024-02-05 08:43am: https://www.animalgenome.org/../FAANG/bbs
  49. 2024-02-01 10:44am: https://www.animalgenome.org/../projects/vt/
  50. 2024-02-01 09:52am: https://www.animalgenome.org/log/2024/
  51. 2024-02-01 09:48am: https://www.animalgenome.org/log/
  52. 2024-02-01 09:48am: https://www.animalgenome.org/log/2024/
  53. 2024-02-01 09:44am: https://www.animalgenome.org/log/2024/
  54. 2024-02-01 02:09am: https://www.animalgenome.org/log/CorrDB/
  55. 2024-02-01 02:09am: https://www.animalgenome.org/CorrDB
  56. 2024-02-01 02:04am: https://www.animalgenome.org/QTLdb
  57. 2024-02-01 02:04am: https://www.animalgenome.org/log/QTLdb/ (2)
  58. 2024-01-31 02:25pm: https://www.animalgenome.org/../projects/vt/
  59. 2024-01-30 09:03pm: https://www.animalgenome.org/../isubeefdb/data_in_database
  60. 2024-01-30 09:03pm: https://www.animalgenome.org/../single_animal_search
  61. 2024-01-30 09:03pm: https://www.animalgenome.org/../isubeefdb/pedigree_view
  62. 2024-01-30 09:02pm: https://www.animalgenome.org/../isubeefdb/progeny_counts
  63. 2024-01-29 09:46am: https://www.animalgenome.org/../isubeefdb/login_check
  64. 2024-01-29 09:16am: https://www.animalgenome.org/../angenmap/
  65. 2024-01-28 09:57pm: https://www.animalgenome.org/../isubeefdb/logout
  66. 2024-01-28 09:56pm: https://www.animalgenome.org/../isudairydb/logout
  67. 2024-01-28 05:32pm: https://www.animalgenome.org/host/isubeefdb/
  68. 2024-01-28 05:31pm: https://www.animalgenome.org/host/isudairydb/
  69. 2024-01-26 10:09am: https://www.animalgenome.org/../isudairydb/js/blank
  70. 2024-01-26 10:09am: https://www.animalgenome.org/../isudairydb/js/ (2)
  71. 2024-01-24 03:46pm: https://www.animalgenome.org/../projects/vt/
  72. 2024-01-23 03:45pm: https://www.animalgenome.org/../projects/vt/
* Red number in parenthesis indicates multiple updates seen in that area
  [Thu Feb 22 07:01:05 2024]
 
Major updates / new additions:
  • Version 9.2 of Livestock Breed Ontology (LBO) data with 1,123 terms is released.
  • Update, Feb 13, 2024
  • An update (version 2.201) of Clinical Measurement Ontology (CMO) data with 3,907 terms from Bioportal is ported to QTLdb/CorrDB curation environment and ontology browsers and viewers.
  • Update, Feb 12, 2024
  • The NRSP8 program home page is revised to reflect the new changes geared towards building applied genomic capacity for animal industries. The specific aims of the new NRSP8 and new program leaders/coordinaors are listed on the same page.
  • Update, Feb 10, 2024
  • Presentation slides from 2024 FAANG Workshop are available on FAANG website.
  • New, Feb 08, 2024
  • Version 2024-02-07 of Vertebrate Trait (VT) ontology data is released with 3,744 terms.
  • Update, Feb 07, 2024
  • Version 9.1 of Livestock Breed Ontology (LBO) data with 1,122 terms is released.
  • Update, Feb 05, 2024
  • Vertebrate Trait (VT) ontology data release has a new version naming format denoted with numeric dates like in 'yyy-mm-dd'. For example its version 13.15 is now 2024-01-17. VT Version 2024-01-17 is released with 3,742 terms.
  • Update, Jan 17, 2024
  • What's new on the NAGRP animal genome web site (#1, 2024)
  • New, Jan 3, 2024
  • New database releases have been made: Animal QTLdb Release #52, and Animal CorrDB Release #20.
  • New, Dec 27, 2023
  • As we have planned (see QTLdb release #51), a total of 13,309 linkage-map–based QTL/association data curated to the Animal QTLdb during 1999 and 2021 have been deposited to Github as of Dec. 17, 2023. This step represents the separation of the legacy data from the current QTLdb, as we move forward with the sequence-based genome maps and SNP-based analysis results. These legact data were on 6 livestock species: cattle, chicken, horse, pigs, sheep, and rainbow trout.
  • New, Dec 18, 2023
  • New cattle genome assembly ARS-UCD2.0 was released on July 1, 2023. As the SNP mappings on this build version is not available on the current dbSNP release (August 2023) we have performed a liftover of 96,180,721 SNPs from ARS-UCD1.0 build with our in-house procedures to accommodate the upcoming QTLdb data releases to include ARS-UCD2.0 build.
  • Update, Dec 12, 2023
  • Version 13.14 of the Vertebrate Trait (VT) ontology data with 3,741 terms and several structural changes and updates.
  • Update, Nov 20, 2023
  • Version 8.10 of Livestock Breed Ontology (LBO) data with 1,121 terms is released.
  • Update, Nov 20, 2023
  • Version 13.13 of the Vertebrate Trait (VT) ontology data with 3,739 terms and several structural changes and updates.
  • Update, Nov 16, 2023
  • Version 8.9 of Livestock Breed Ontology (LBO) data with 1,120 terms is released.
  • Update, Oct 26, 2023
  • Version 13.12 of the Vertebrate Trait (VT) ontology data with 3,733 terms and several structural changes and updates.
  • Update, Oct 25, 2023
  • An update (version 2.195) of Clinical Measurement Ontology (CMO) data with 3,897 terms from Bioportal is ported to QTLdb/CorrDB curation environment and ontology browsers and viewers.
  • Update, Oct 23, 2023
  • Started a process to retire inactive web pages, services, and materials.
  • https://www.animalgenome.org/aquaculture
  • https://www.animalgenome.org/pig
  • https://www.animalgenome.org/cattle
  • https://www.animalgenome.org/horse
  • https://www.animalgenome.org/poultry
  • https://www.animalgenome.org/sheep
  • https://www.animalgenome.org/bioinfo/service
  • https://www.animalgenome.org/bioinfo/service/computer
  • https://www.animalgenome.org/other/
  • https://www.animalgenome.org/other/Joomla
  • https://www.animalgenome.org/share/
  • https://www.animalgenome.org/share/critt
  • https://www.animalgenome.org/share/visions
  • https://www.animalgenome.org/share/survey
  • https://www.animalgenome.org/share/letter
  • https://www.animalgenome.org/blast
  • Reorganized:
  • https://www.animalgenome.org/repository/ https://www.animalgenome.org/tools/repository
  • Update, Oct 7, 2023
  • As part of our effords to "ontologize" livestock trait terms in the process of data annotation into the QTLdb/CorrDB, two additional ontologies have been introduced for ontology term mappings: Uberon anatomy/tissue ontology, and rat disease ontology. The outcomes from this work may be visible to the public in the near future.
  • Update, Oct 3, 2023
  • Obsoleted websites for NRSP8 cattle, chicken, horse, pig, and sheep coordination programs, and placed the website materials on archive.
  • Update, Oct 2, 2023
    "What's New" on Archive:

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