Release 55
(Dec 23, 2024)

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  1. Bouwman AC, Bovenhuis H, Visker MH, van Arendonk JA (2011) "Genome-wide association of milk fatty acids in Dutch dairy cattle", BMC Genomics, 2011 12: 43 [ List Data ][ See Abstract ]
  2. Cole JB, Wiggans GR, Ma L, Sonstegard TS, Lawlor TJ Jr, Crooker BA, Van Tassell CP, Yang J, Wang S, Matukumalli LK, Da Y (2011) "Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows", BMC Genomics, 2011 12:408 [ List Data ][ See Abstract ]
  3. Saatchi M, Garrick DJ, Tait RG Jr, Mayes MS, Drewnoski M, Schoonmaker J, Diaz C, Beitz DC, Reecy JM (2013) "Genome-wide association and prediction of direct genomic breeding values for composition of fatty acids in Angus beef cattle", BMC Genomics, 2013 14:730 [ List Data ][ See Abstract ]
  4. Wu X, Fang M, Liu L, Wang S, Liu J, Ding X, Zhang S, Zhang Q, Zhang Y, Qiao L, Lund MS, Su G, Sun D (2013) "Genome wide association studies for body conformation traits in the Chinese Holstein cattle population", BMC genomics, 2013 14: 897 [ List Data ][ See Abstract ]
  5. Mahdi Saatchi, Robert D Schnabel, Jeremy F Taylor and Dorian J Garrick (2014) "Large-effect pleiotropic or closely linked QTL segregate within and across ten US cattle breeds", BMC Genomics, 2014 15:442 [ List Data ][ See Abstract ]
  6. Raven LA, Cocks BG, Hayes BJ (2014) "Multibreed genome wide association can improve precision of mapping causative variants underlying milk production in dairy cattle", BMC genomics, 2014 15: 62 [ List Data ][ See Abstract ]
  7. Thompson-Crispi KA, Sargolzaei M, Ventura R, Abo-Ismail M, Miglior F, Schenkel F, Mallard BA (2014) "A genome-wide association study of immune response traits in Canadian Holstein cattle", BMC genomics, 2014 15: 559 [ List Data ][ See Abstract ]
  8. Buitenhuis B, Janss LL, Poulsen NA, Larsen LB, Larsen MK, Sørensen P (2014) "Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle", BMC genomics, 2014 15(1): 1112 [ List Data ][ See Abstract ]
  9. Jiang L, Liu X, Yang J, Wang H, Jiang J, Liu L, He S, Ding X, Liu J, Zhang Q (2014) "Targeted resequencing of GWAS loci reveals novel genetic variants for milk production traits", BMC genomics, 2014 15(1): 1105 [ List Data ][ See Abstract ]
  10. Wang X, Zhong J, Gao Y, Ju Z, Huang J (2014) "A SNP in intron 8 of CD46 causes a novel transcript associated with mastitis in Holsteins", BMC genomics, 2014 15: 630 [ List Data ][ See Abstract ]
  11. Doran Anthony G, Berry Donagh P, Creevey Christopher J (2014) "Whole genome association study identifies regions of the bovine genome and biological pathways involved in carcass trait performance in Holstein-Friesian cattle", BMC genomics, 2014 15: 837 [ List Data ][ See Abstract ]
  12. Saatchi M, Beever JE, Decker JE, Faulkner DB, Freetly HC, Hansen SL, Yampara-Iquise H, Johnson KA, Kachman SD, Kerley MS, Kim J, Loy DD, Marques E, Neibergs HL, Pollak EJ, Schnabel RD, Seabury CM, Shike DW, Snelling WM, Spangler ML, Weaber RL, Garrick DJ, Taylor JF (2014) "QTLs associated with dry matter intake, metabolic mid-test weight, growth and feed efficiency have little overlap across 4 beef cattle studies", BMC genomics, 2014 15: 1004 [ List Data ][ See Abstract ]
  13. Höglund JK, Sahana G, Brøndum RF, Guldbrandtsen B, Buitenhuis B, Lund MS (2014) "Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data", BMC genomics, 2014 15: 790 [ List Data ][ See Abstract ]
  14. Venhoranta H, Pausch H, Flisikowski K, Wurmser C, Taponen J, Rautala H, Kind A, Schnieke A, Fries R, Lohi H, Andersson M (2014) "In frame exon skipping in UBE3B is associated with developmental disorders and increased mortality in cattle", BMC genomics, 2014 15: 890 [ List Data ][ See Abstract ]
  15. Zhang L, Jia S, Yang M, Xu Y, Li C, Sun J, Huang Y, Lan X, Lei C, Zhou Y, Zhang C, Zhao X, Chen H (2014) "Detection of copy number variations and their effects in Chinese bulls", BMC genomics, 2014 15: 480 [ List Data ][ See Abstract ]
  16. Xu L, Cole JB, Bickhart DM, Hou Y, Song J, VanRaden PM, Sonstegard TS, Van Tassell CP, Liu GE (2014) "Genome wide CNV analysis reveals additional variants associated with milk production traits in Holsteins", BMC genomics, 2014 15: 683 [ List Data ][ See Abstract ]
  17. de Camargo GMF, Porto-Neto LR, Kelly MJ, Bunch RJ, McWilliam SM, Tonhati H, Lehnert SA, Fortes MRS, Moore SS (2015) "Non-synonymous mutations mapped to chromosome X associated with andrological and growth traits in beef cattle", BMC genomics, 2015 16: 384 [ List Data ][ See Abstract ]
  18. Lemos MVA, Chiaia HLJ, Berton MP, Feitosa FLB, Aboujaoud C, Camargo GMF, Pereira ASC, Albuquerque LG, Ferrinho AM, Mueller LF, Mazalli MR, Furlan JJM, Carvalheiro R, Gordo DM, Tonussi R, Espigolan R, Silva RM, de Oliveira HN, Duckett S, Aguilar I, Baldi F (2016) "Genome-wide association between single nucleotide polymorphisms with beef fatty acid profile in Nellore cattle using the single step procedure", BMC genomics, 2016 17(1): 213 [ List Data ][ See Abstract ]
  19. Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Alexandre PA, Rosen BD, Schroeder SG, Carvalheiro R, de Rezende Neves HH, Sonstegard TS, Van Tassell CP, Ferraz JB, Fukumasu H, Garcia JF, Liu GE (2016) "Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus", BMC genomics, 2016 17(1): 419 [ List Data ][ See Abstract ]
  20. Kemper K E, Littlejohn M D, Lopdell T, Hayes B J, Bennett L E, Williams R P, Xu X Q, Visscher P M, Carrick M J, Goddard M E (2016) "Leveraging genetically simple traits to identify small-effect variants for complex phenotypes", BMC genomics, 2016 17(1): 858 [ List Data ][ See Abstract ]
  21. Sasaki S, Ibi T, Akiyama T, Fukushima M, Sugimoto Y (2016) "Loss of maternal ANNEXIN A10 via a 34-kb deleted-type copy number variation is associated with embryonic mortality in Japanese Black cattle", BMC genomics, 2016 17(1): 968 [ List Data ][ See Abstract ]
  22. Seabury CM, Oldeschulte DL, Saatchi M, Beever JE, Decker JE, Halley YA, Bhattarai EK, Molaei M, Freetly HC7, Hansen SL3, Yampara-Iquise H5, Johnson KA8, Kerley MS5, Kim J, Loy DD, Marques E, Neibergs HL, Schnabel RD, Shike DW, Spangler ML, Weaber RL, Garrick DJ, Taylor JF (2017) "Genome-wide association study for feed efficiency and growth traits in U.S. beef cattle", BMC genomics, 2017 18(1): 386 [ List Data ][ See Abstract ]
  23. Zhu B, Niu H, Zhang W, Wang Z, Liang Y, Guan L, Guo P, Chen Y, Zhang L, Guo Y, Ni H, Gao X, Gao H, Xu L, Li J (2017) "Genome wide association study and genomic prediction for fatty acid composition in Chinese Simmental beef cattle using high density SNP array", BMC genomics, 2017 18(1): 464 [ List Data ][ See Abstract ]
  24. Jiang J, Shen B, O'Connell JR, VanRaden PM, Cole JB, Ma L (2017) "Dissection of additive, dominance, and imprinting effects for production and reproduction traits in Holstein cattle", BMC genomics, 2017 18(1): 425 [ List Data ][ See Abstract ]
  25. Pausch H, Emmerling R, Gredler-Grandl B, Fries R, Daetwyler HD, Goddard ME (2017) "Meta-analysis of sequence-based association studies across three cattle breeds reveals 25 QTL for fat and protein percentages in milk at nucleotide resolution", BMC genomics, 2017 18(1): 853 [ List Data ][ See Abstract ]
  26. Frischknecht M, Bapst B, Seefried FR, Signer-Hasler H, Garrick D, Stricker C, Intergenomics Consortium, Fries R, Russ I, Sölkner J, Bieber A, Strillacci MG, Gredler-Grandl B, Flury C (2017) "Genome-wide association studies of fertility and calving traits in Brown Swiss cattle using imputed whole-genome sequences.", BMC genomics, 2017 18(1): 910 [ List Data ][ See Abstract ]
  27. Lopdell TJ, Tiplady K, Struchalin M, Johnson TJJ, Keehan M, Sherlock R, Couldrey C, Davis SR, Snell RG, Spelman RJ, Littlejohn MD (2017) "DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content", BMC genomics, 2017 18(1): 968 [ List Data ][ See Abstract ]
  28. Frischknecht M, Pausch H, Bapst B, Signer-Hasler H, Flury C, Garrick D, Stricker C, Fries R, Gredler-Grandl B (2017) "Highly accurate sequence imputation enables precise QTL mapping in Brown Swiss cattle", BMC genomics, 2017 18(1): 999 [ List Data ][ See Abstract ]
  29. Carignano HA, Roldan DL, Beribe MJ, Raschia MA, Amadio A, Nani JP, Gutierrez G, Alvarez I, Trono K, Poli MA, Miretti MM (2018) "Genome-wide scan for commons SNPs affecting bovine leukemia virus infection level in dairy cattle", BMC genomics, 2018 19(1): 142 [ List Data ][ See Abstract ]
  30. Zhou Y, Connor EE, Wiggans GR1, Lu Y, Tempelman RJ, Schroeder SG, Chen H, Liu GE (2018) "Genome-wide copy number variant analysis reveals variants associated with 10 diverse production traits in Holstein cattle", BMC genomics, 2018 19(1): 314 [ List Data ][ See Abstract ]
  31. Cai Z, Guldbrandtsen B, Lund MS, Sahana G (2018) "Prioritizing candidate genes post-GWAS using multiple sources of data for mastitis resistance in dairy cattle", BMC genomics, 2018 19(1): 656 [ List Data ][ See Abstract ]
  32. de Klerk B, Emam M, Thompson-Crispi KA, Sargolzaei M, van der Poel JJ, Mallard BA (2018) "A genome-wide association study for natural antibodies measured in blood of Canadian Holstein cows", BMC genomics, 2018 19(1): 694 [ List Data ][ See Abstract ]
  33. Gao Y, Jiang J, Yang S, Cao J, Han B, Wang Y, Zhang Y, Yu Y, Zhang S, Zhang Q, Fang L, Cantrell B, Sun D (2018) "Genome-wide association study of Mycobacterium avium subspecies Paratuberculosis infection in Chinese Holstein", BMC genomics, 2018 19(1): 972 [ List Data ][ See Abstract ]
  34. Xu L, Yang L, Wang L, Zhu B, Chen Y, Gao H, Gao X, Zhang L, Liu GE, Li J (2019) "Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle", BMC genomics, 2019 20(1): 31 [ List Data ][ See Abstract ]
  35. Cai Z, Guldbrandtsen B, Lund MS, Sahana G (2019) "Prioritizing candidate genes for fertility in dairy cows using gene-based analysis, functional annotation and differential gene expression", BMC genomics, 2019 20(1): 255 [ List Data ][ See Abstract ]
  36. May K, Scheper C, Brügemann K, Yin T, Strube C, Korkuć P, Brockmann GA, König S (2019) "Genome-wide associations and functional gene analyses for endoparasite resistance in an endangered population of native German Black Pied cattle", BMC genomics, 2019 20(1): 277 [ List Data ][ See Abstract ]
  37. Gebreyesus G, Buitenhuis A J, Poulsen N A, Visker M H P W, Zhang Q, van Valenberg H J F, Sun D, Bovenhuis H (2019) "Multi-population GWAS and enrichment analyses reveal novel genomic regions and promising candidate genes underlying bovine milk fatty acid composition", BMC genomics, 2019 20(1): 178 [ List Data ][ See Abstract ]
  38. Leal-Gutiérrez JD, Elzo MA, Johnson D D, Hamblen H, Mateescu RG (2019) "Genome wide association and gene enrichment analysis reveal membrane anchoring and structural proteins associated with meat quality in beef", BMC genomics, 2019 20(1): 151 [ List Data ][ See Abstract ]
  39. Kiser JN, Keuter EM, Seabury CM, Neupane M, Moraes JGN, Dalton J, Burns GW, Spencer TE, Neibergs HL (2019) "Validation of 46 loci associated with female fertility traits in cattle", BMC genomics, 2019 20(1): 576 [ List Data ][ See Abstract ]
  40. Zhou J, Liu L, Chen CJ, Zhang M, Lu X, Zhang Z, Huang X, Shi Y (2019) "Genome-wide association study of milk and reproductive traits in dual-purpose Xinjiang Brown cattle", BMC genomics, 2019 20(1): 827 [ List Data ][ See Abstract ]
  41. Kiser JN, Clancey E, Moraes JGN, Dalton J, Burns GW, Spencer TE, Neibergs HL (2019) "Identification of loci associated with conception rate in primiparous Holstein cows", BMC genomics, 2019 20(1): 840 [ List Data ][ See Abstract ]
  42. Carreño LOD, da Conceição Pessoa M, Espigolan R, Takada L, Bresolin T, Cavani L, Baldi F, Carvalheiro R, de Albuquerque LG, da Fonseca R (2019) "Genome Association Study for Visual Scores in Nellore Cattle Measured at Weaning", BMC genomics, 2019 20(1): 150 [ List Data ][ See Abstract ]
  43. van den Berg I, Hayes B J, Chamberlain A J, Goddard M E (2019) "Overlap between eQTL and QTL associated with production traits and fertility in dairy cattle", BMC Genomics, 2019 20(1): 291 [ List Data ][ See Abstract ]
  44. Freebern E, Santos DJA, Fang L, Jiang J, Parker Gaddis KL, Liu GE, VanRaden PM, Maltecca C, Cole JB, Ma L (2020) "GWAS and fine-mapping of livability and six disease traits in Holstein cattle", BMC genomics, 2020 21(1): 41 [ List Data ][ See Abstract ]
  45. Zhang F, Wang Y, Mukiibi R, Chen L, Vinsky M, Plastow G, Basarab J, Stothard P, Li C (2020) "Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: I: feed efficiency and component traits", BMC genomics, 2020 21(1): 36 [ List Data ][ See Abstract ]
  46. Wang Y, Zhang F, Mukiibi R, Chen L, Vinsky M, Plastow G, Basarab J, Stothard P, Li C (2020) "Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: II: carcass merit traits", BMC genomics, 2020 21(1): 38 [ List Data ][ See Abstract ]
  47. Smith JL, Wilson ML, Nilson SM, Rowan TN, Oldeschulte DL, Schnabel RD, Decker JE, Seabury CM (2020) "Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle", BMC genomics, 2020 20(1): 926 [ List Data ][ See Abstract ]
  48. Vanvanhossou SFU, Scheper C, Dossa LH, Yin T, Brügemann K, König S (2020) "A multi-breed GWAS for morphometric traits in four Beninese indigenous cattle breeds reveals loci associated with conformation, carcass and adaptive traits", BMC genomics, 2020 21(1): 783 [ List Data ][ See Abstract ]
  49. Cao M, Shi L, Peng P, Han B, Liu L, Lv X, Ma Z, Zhang S, Sun D (2021) "Determination of genetic effects and functional SNPs of bovine HTR1B gene on milk fatty acid traits", BMC Genomics, 2021 22(1): 575 [ List Data ][ See Abstract ]
  50. Rafter P, Gormley IC, Purfield D, Parnell AC, Naderi S, Berry DP (2021) "Genome-wide association analyses of carcass traits using copy number variants and raw intensity values of single nucleotide polymorphisms in cattle", BMC Genomics, 2021 22(1): 757 [ List Data ][ See Abstract ]
  51. Lin S, Ke C, Liu L, Gao Y, Xu L, Han B, Zhao Y, Zhang S, Sun D (2022) "Genome-wide association studies for immunoglobulin concentrations in colostrum and serum in Chinese Holstein", BMC Genomics, 2022 23(1): 41 [ List Data ][ See Abstract ]
  52. Mota LFM, Santos SWB, Júnior GAF, Bresolin T, Mercadante MEZ, Silva JAV, Cyrillo JNSG, Monteiro FM, Carvalheiro R, Albuquerque LG (2022) "Meta-analysis across Nellore cattle populations identifies common metabolic mechanisms that regulate feed efficiency-related traits", BMC Genomics, 2022 23(1): 424 [ List Data ][ See Abstract ]
  53. Butler M L, Hartman A R, Bormann J M, Weaber R L, Grieger D M, Rolf M M (2022) "Genome-wide association study of beef bull semen attributes", BMC Genomics, 2022 23(1): 74 [ List Data ][ See Abstract ]
  54. Reding JJ, van der Westhuizen RR, Berry DP, van Marle-Köster E (2023) "Understanding the underlying genetic mechanisms for age at first calving, inter-calving period and scrotal circumference in Bonsmara cattle", BMC Genomics, 2023 24(1): 480 [ List Data ][ See Abstract ]
  55. Haque MA, Lee YM, Ha JJ, Jin S, Park B, Kim NY, Won JI, Kim JJ (2024) "Genome-wide association study identifies genomic regions associated with key reproductive traits in Korean Hanwoo cows", BMC Genomics, 2024 25(1): 496 [ List Data ][ See Abstract ]
In addition, there are matches in 5 other species QTLdb:

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team