| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 3 (cM) |
| QTL Span: | 3.49-3.51 (cM)
7.9-7.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | eQTL |
| Model tested: | Mendelian |
| Test base: | chromosome-wise |
| Threshold significance level: | Significant |
 |
LOD_score | 2.81 | | F_Stat | 7.11 | | P_values | 0.000001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a Duroc x Pietrain cross. |
| Breeds associated:
|
| Design: | Animals were gentoyped for 116 microsatellite markers, and samples from the longissimus dorsi were subjected to expression microarray analysis and testing for drip loss. |
| Analysis: | A regression model was used. |
| Software: | CRIMAP, QTL Express, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ponsuksili, S; Jonas, E; Murani, E; Phatsara, C; Srikanchai, T; Walz, C; Schwerin, M; Schellander, K; Wimmers, K |
| Affiliation: | Research Institute for the Biology of Farm Animals (FBN), Research Unit 'Molecular Biology', Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany; wimmers@fbn-dummerstorf.de |
| Title: | Trait correlated expression combined with expression QTL analysis reveals biological pathways and candidate genes affecting water holding capacity of muscle. |
| Journal: | BMC genomics, 2008, 9: 367 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | ProbeSet=Ssc.9710.1.A1.at; |
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