| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
64.1-65.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81235245 |
| Peak: | |
| Lower, "Significant": | rs81327535 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Suggestive |
 |
VARIANCE | 0.37% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs represented two genetic lines: a Large White-Landrace composite line selected for increased litter size, and an HD commercial cross selected for lean growth. |
| Breeds associated:
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| Design: | Pigs were challenged with PRRSV prior to GWAS for susceptibility traits. Animals were genotyped using the Illumina PorcineSNP60 BeadChip, and a total of 57,390 SNPs were used for analysis. |
| Analysis: | GWAS was performed for PRRSV viremia, viral load, antibody level, and ADG using a BayesB model. |
| Software: | GenSel |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Walker LR, Jobman EE, Sutton KM, Wittler J, Johnson RK, Ciobanu DC |
| Affiliation: | Animal Science Department, University of Nebraska, Lincoln, NE |
| Title: | Genome-wide association analysis for porcine reproductive and respiratory syndrome virus susceptibility traits in two genetic populations of pigs |
| Journal: | Journal of animal science, 2019, 97(8): 3253-3261 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | following PRRSV challenge |
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