Release 56
(Apr 24, 2025)

QTL 23980 Description:

 Trait Information
Trait name: Abomasum displacement Vertebrate Trait Ontology: Stomach morphology trait
Reported name: Abomasum displacement Product Trait Ontology: n/a
Symbol: AD Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:24
QTL Peak Location:71.23 (cM)
QTL Span:71.23-71.23 (cM)
57.4-57.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109482988
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values6.31E-4
Dominance effect:n/a
Additive effect:n/a
Associated Gene:NEDD4L (neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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    •  QTL Experiment in Brief
    Animals:Animals were German Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for SNP association with left-sided abomasum displacement. A total of 36226 SNP were used for the analysis.
    Analysis:A mixed linear model was used.
    Software:TASSEL, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Mömke S, Sickinger M, Lichtner P, Doll K, Rehage J, Distl O
    Affiliation:Institute for Animal Breeding and Genetics, University of Veterinary Medicine Hannover, Buntweeg 17p, 30559 Hannover, Germany
    Title:Genome-wide association analysis identifies loci for left-sided displacement of the abomasum in German Holstein cattle
    Journal:Journal of dairy science, 2013, 96(6):3959-64
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #23548285
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    • Cite this Data:

    Animal QTLdb: QTL23980 was published in 2013, and was curated into QTLdb on 2014-01-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:23980

     

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