| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 123.76 (cM) |
| QTL Span: | 123.76-123.76 (cM)
112.3-112.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110707003 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #167640
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were lactating Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Bovine Geneseek Genomic Profiler 26K BeadChip, with data imputed to Illumina BovineHD, and analyzed for anti-Mullerian hormone levels. A total of 636,471 SNPs were used for analysis. |
| Analysis: | A mixed linear model-based association analysis was performed based on the leave-one-chromosome-out method. |
| Software: | PLINK, FImpute2, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gobikrushanth M, Purfield D C, Colazo M G, Butler S T, Wang Z, Ambrose D J |
| Affiliation: | Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2P5; Livestock Research and Extension Branch, Alberta Agriculture and Forestry, Edmonton, AB, Canada T6H 5T6 |
| Title: | The relationship between serum anti-Müllerian hormone concentrations and fertility, and genome-wide associations for anti-Müllerian hormone in Holstein cows |
| Journal: | Journal of dairy science, 2019, 101(8): 7563-7574 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #29729909
Add your comments
Note similar findings
Note contradictions
|
