"GO Slim" Classifications
| GO_ROOT: | Main GO classes Source: http://www.geneontology.org |
|---|---|
| GO_basic: | The basic version of the GO filtered such that the graph is guaranteed to be acyclic, and annotations can be propagated up the graph. Source: http://www.geneontology.org/page/download-ontology |
| GO_Slim: | "Generic GO Slims": http://www.geneontology.org/GO.slims.shtml Source: ftp://ftp.geneontology.org/pub/go/GO_slims/goslim_generic.obo |
| GO_Slim2: | The same as GO_slim except that the three root classes are removed. |
| GOA2GO: | "GO Slims": http://www.geneontology.org/GO.slims.shtml Source: ftp://ftp.geneontology.org/pub/go/GO_slims/goslim_goa.obo |
| EGAD2GO: | "map2go": http://www.geneontology.org/GO.indices.shtml Source: from http://www.geneontology.org/external2go/egad2go |
| MGI_GO_slim1: | Mouse GDB GO Slim (manually edited) Source: http://www.spatial.maine.edu/~mdolan/MGI_GO_Slim.html |
| MGI_GO_slim2: | MGI GO Slim (Trimed for first level terms [marked with "="]) Source: http://www.spatial.maine.edu/~mdolan/mgi_go_slim.go |
| aqua classes: | Aqua gene classes. From Dr. Jianbo Yao on analyzing R. Trout EST data set Source: Dr. Jianbo Yao of West Virginia Univ. (Jianbo.Yao@mail.wvu.edu) |
| immune classes: | Immune system gene classes. Source: Dr. Toni Whistler of CDC (taw6@cdc.gov) |